MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus lentus
3_3BalbC2O2_S3
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 274
bases: 2,889,488 bps
CDS: 2,757
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 2,819
Total number of protein coding genes annotated/found:
2,757
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5053|JADGLT010000233.1
SEQF5053_02015
Genome Viewer
NA
AA
1293/431
24329-23037
Asparagine--tRNA ligase
SEQF5053|JADGLT010000233.1
SEQF5053_02016
Genome Viewer
NA
AA
2694/898
27085-24392
3'-5' exonuclease DinG
SEQF5053|JADGLT010000233.1
SEQF5053_02017
Genome Viewer
NA
AA
969/323
28064-27096
Bifunctional ligase/repressor BirA
SEQF5053|JADGLT010000233.1
SEQF5053_02018
Genome Viewer
NA
AA
1212/404
29262-28051
CCA-adding enzyme
SEQF5053|JADGLT010000233.1
SEQF5053_02019
Genome Viewer
NA
AA
1122/374
30385-29264
N-acetyl-alpha-D-glucosaminyl L-malate synthase
SEQF5053|JADGLT010000233.1
SEQF5053_02020
Genome Viewer
NA
AA
336/112
30722-30387
putative protein YpjD
SEQF5053|JADGLT010000233.1
SEQF5053_02021
Genome Viewer
NA
AA
690/230
32082-31393
hypothetical protein
SEQF5053|JADGLT010000233.1
SEQF5053_02022
Genome Viewer
NA
AA
594/198
32729-32136
hypothetical protein
SEQF5053|JADGLT010000233.1
SEQF5053_02023
Genome Viewer
NA
AA
789/263
33710-32922
hypothetical protein
SEQF5053|JADGLT010000233.1
SEQF5053_02024
Genome Viewer
NA
AA
675/225
34422-33748
Menaquinol-cytochrome c reductase cytochrome b subunit
SEQF5053|JADGLT010000233.1
SEQF5053_02025
Genome Viewer
NA
AA
504/168
34939-34436
Cytochrome b6-f complex iron-sulfur subunit
SEQF5053|JADGLT010000233.1
SEQF5053_02026
Genome Viewer
NA
AA
435/145
35654-35220
hypothetical protein
SEQF5053|JADGLT010000233.1
SEQF5053_02027
Genome Viewer
NA
AA
540/180
36193-35654
hypothetical protein
SEQF5053|JADGLT010000233.1
SEQF5053_02028
Genome Viewer
NA
AA
1239/413
37445-36207
Beta-barrel assembly-enhancing protease
SEQF5053|JADGLT010000233.1
SEQF5053_02029
Genome Viewer
NA
AA
1074/358
38534-37461
3-dehydroquinate synthase
SEQF5053|JADGLT010000233.1
SEQF5053_02030
Genome Viewer
NA
AA
1167/389
39709-38543
Chorismate synthase
SEQF5053|JADGLT010000233.1
SEQF5053_02031
Genome Viewer
NA
AA
453/151
40280-39828
Nucleoside diphosphate kinase
SEQF5053|JADGLT010000233.1
SEQF5053_02032
Genome Viewer
NA
AA
963/321
41317-40355
Heptaprenyl diphosphate synthase component 2
SEQF5053|JADGLT010000233.1
SEQF5053_02033
Genome Viewer
NA
AA
705/235
42034-41330
Demethylmenaquinone methyltransferase
SEQF5053|JADGLT010000233.1
SEQF5053_02034
Genome Viewer
NA
AA
492/164
42529-42038
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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